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RNeasy Mini Handbook 10/2019
9
RNAse/S1 nuclease protection
Microarrays
The RNeasy Kits allow the parallel processing of multiple samples in less than 30 min.
Time-consuming and tedious methods, such as CsCl step-gradient ultracentrifugation and
alcohol precipitation, or methods involving the use of toxic substances, such as phenol and/or
chloroform, are replaced by the RNeasy procedure.
Principle and procedure
RNA purification using RNeasy technology
The RNeasy procedure represents a well-established technology for RNA purification. This
technology combines the selective binding properties of a silica-based membrane with the
speed of microspin technology. A specialized high-salt buffer system allows up to 100 µg of
RNA longer than 200 bases to bind to the RNeasy silica membrane. Biological samples are
first lysed and homogenized in the presence of a highly denaturing guanidine-thiocyanate
containing buffer, which immediately inactivates RNAses to ensure purification of intact RNA.
Ethanol is added to provide appropriate binding conditions, and the sample is then applied
to an RNeasy Mini spin column, where the total RNA binds to the membrane and contaminants
are efficiently washed away. High-quality RNA is then eluted in 30100 µl water.
With the RNeasy procedure, all RNA molecules longer than 200 nucleotides are purified. The
procedure provides an enrichment for mRNA since most RNAs <200 nucleotides (such as 5.8S
rRNA, 5S rRNA, and tRNAs, which together comprise 1520% of total RNA) are selectively
excluded. The size distribution of the purified RNA is comparable to that obtained by
centrifugation through a CsCl cushion, where small RNAs do not sediment efficiently. Protocols
for purification of small RNA using RNeasy Kits are available at
www.qiagen.com/goto/microRNAprotocols.
In this handbook, different protocols are provided for different starting materials. The protocols
differ primarily in the lysis and homogenization of the sample and in the adjustment of the
conditions for binding RNA to the RNeasy membrane. Once the sample is bound to the
membrane, the protocols are similar (see
Figure 1, page 10).
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